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CAZyme Gene Cluster: MGYG000000013_2|CGC1
CGC gene composition diagram |
Gene composition table |
Substrate predicted by eCAMI subfamily |
Substrate predicted by dbCAN-PUL search |
Genomic context
CGC gene composition diagram
Gene composition table
| Protein ID | Protein Name | Type | Start | End | Strand | Signature |
|---|---|---|---|---|---|---|
| MGYG000000013_00497 | hypothetical protein |
CAZyme | 214 | 2979 | - | GH106 |
| MGYG000000013_00498 | Exo-poly-alpha-D-galacturonosidase |
CAZyme | 2976 | 4379 | - | GH28 |
| MGYG000000013_00499 | hypothetical protein |
null | 4376 | 4981 | - | DUF4450 |
| MGYG000000013_00500 | hypothetical protein |
CAZyme | 4932 | 6467 | - | GH28 |
| MGYG000000013_00501 | hypothetical protein |
CAZyme | 6516 | 7754 | - | CE12 |
| MGYG000000013_00502 | Beta-galactosidase |
CAZyme | 7884 | 10787 | - | GH2 |
| MGYG000000013_00503 | hypothetical protein |
CAZyme | 11003 | 13951 | + | GH42| GH43_18| GH43 |
| MGYG000000013_00504 | hypothetical protein |
CAZyme | 14011 | 15393 | + | GH28 |
| MGYG000000013_00505 | hypothetical protein |
null | 15482 | 16168 | + | Lipase_GDSL_lke |
| MGYG000000013_00506 | hypothetical protein |
null | 16271 | 18352 | - | SusD-like_3| SusD_RagB |
| MGYG000000013_00507 | TonB-dependent receptor SusC |
TC | 18377 | 21508 | - | 1.B.14.6.1 |
| Protein ID | Protein Name | Type | Start | End | Strand | Signature |
Substrate predicted by eCAMI subfamilies is pectin
| Protein ID | eCAMI subfam | CAZyme substrate |
|---|---|---|
| MGYG000000013_00497 | GH106_e0|3.2.1.174 | pectin |
| MGYG000000013_00498 | GH28_e52|3.2.1.- | pectin |
| MGYG000000013_00500 | GH28_e26|3.2.1.- | pectin |
| MGYG000000013_00501 | CE12_e46 | |
| MGYG000000013_00502 | GH2_e63|3.2.1.23 | beta-galactan |
| MGYG000000013_00503 | GH43_e26|GH42_e7|3.2.1.55 | xylan |
| MGYG000000013_00504 | GH28_e36|3.2.1.67|3.2.1.- | pectin |
Substrate predicted by dbCAN-PUL is pectin download this fig
